Basic Information
Locus ID:
Zma_g11925
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr06 | 21130481 | 21134102 | - | Zma_g11925 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 44,765.50 Da | 40.08 | 91.70 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 89 | 351 | 3.4E-86 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 88 | 337 | 6.53E-42 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 115 | 412 | 8.2E-93 | IPR027417 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 117 | 275 | 29.473782 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 284 | 356 | 17.007721 | IPR020587 |
| PRINTS | PR00142 | RecA protein signature | 327 | 356 | 1.4E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 380 | 397 | 1.4E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 293 | 321 | 1.4E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 175 | 204 | 1.4E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 208 | 237 | 1.4E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 246 | 275 | 1.4E-47 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_034585641.1 | DNA repair protein recA homolog 2, mitochondrial-like isoform X1 [Setaria viridis] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VF85 | RECA_2 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_16560 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology