Basic Information
Locus ID:
Zma_g11805
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr06 | 20377954 | 20378838 | - | Zma_g11805 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.55 | 31,764.22 Da | 68.32 | 52.21 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 246 | 283 | 4.97052E-10 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 245 | 289 | 9.1E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 245 | 290 | 8.72E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 224 | 294 | 1.6E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 246 | 283 | 7.4E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 246 | 284 | 10.881201 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 64 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | NP_001168025.1 | putative RING zinc finger domain superfamily protein [Zea mays] | 0 |
| TrEMBL | A0A811P5V8 | RING-type domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS23593 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology