Basic Information
Locus ID:
Zma_g10916
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
E3 ubiquitin ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr06 | 14616931 | 14630954 | - | Zma_g10916 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 140,384.80 Da | 49.51 | 74.61 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 645 | 803 | 6.66509E-27 | - |
| CDD | cd12108 | Hr-like | 296 | 424 | 4.95143E-14 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1113 | 1156 | 6.95617E-18 | - |
| CDD | cd12108 | Hr-like | 39 | 165 | 1.63799E-32 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 42 | 167 | 2.3E-13 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1161 | 1218 | 1.1E-23 | IPR039512 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 643 | 803 | 7.1E-7 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 293 | 425 | 3.3E-6 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 985 | 1060 | 2.6E-18 | IPR008913 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 977 | 1041 | 1.16E-16 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1112 | 1159 | 4.86E-7 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1051 | 1106 | 3.27E-15 | IPR037275 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 640 | 859 | 1.6E-24 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1109 | 1157 | 2.2E-8 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 295 | 443 | 1.3E-15 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1185 | 1226 | 1.2E-16 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 34 | 185 | 2.8E-33 | - |
| SMART | SM00184 | ring_2 | 1114 | 1155 | 1.7E-5 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 978 | 1047 | 25.705652 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1114 | 1155 | 11.235273 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1050 | 1113 | 29.816021 | IPR017921 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 878 | 897 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 875 | 897 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 540 | 566 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_025814043.1 | zinc finger protein BRUTUS-like [Panicum hallii] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SK57 | Zinc finger protein BRUTUS (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_55247 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology