Basic Information
Locus ID:
Zma_g10615
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr06 | 12280314 | 12280859 | - | Zma_g10615 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 19,887.56 Da | 32.73 | 96.69 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 37 | 99 | 2.17808E-13 | IPR002048 |
| CDD | cd00051 | EFh | 113 | 169 | 5.88933E-9 | IPR002048 |
| Pfam | PF13202 | EF hand | 116 | 136 | 0.0026 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 37 | 97 | 1.2E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 28 | 169 | 5.04E-30 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 108 | 171 | 2.7E-13 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 15 | 103 | 2.6E-17 | - |
| SMART | SM00054 | efh_1 | 74 | 102 | 0.03 | IPR002048 |
| SMART | SM00054 | efh_1 | 37 | 65 | 0.13 | IPR002048 |
| SMART | SM00054 | efh_1 | 113 | 141 | 0.12 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 109 | 144 | 12.281773 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 33 | 68 | 12.811786 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 70 | 105 | 10.608049 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 83 | 95 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 46 | 58 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_037417751.1 | probable calcium-binding protein CML12 [Triticum dicoccoides] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A077S1F2 | Calcium-binding protein CML16 OS=Triticum aestivum OX=4565 GN=TRAES_3BF271400010CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology