Basic Information
Locus ID:
Zma_g10509
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Protein kinase domain containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr06 | 10980726 | 10981772 | - | Zma_g10509 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 38,509.47 Da | 47.34 | 82.50 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 47 | 345 | 7.7E-56 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 42 | 347 | 1.48E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 41 | 143 | 1.4E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 348 | 1.9E-53 | - |
| SMART | SM00220 | serkin_6 | 47 | 345 | 3.3E-68 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 47 | 345 | 41.431713 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 53 | 82 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004963947.2 | putative cyclin-dependent kinase F-2 [Setaria italica] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1E5VQM8 | Putative cyclin-dependent kinase F-2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0011546 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH05.3320, BH05.3342, CH05.3446 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0388610, gene-QOZ80_5BG0435650 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.1HG0084710.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_023515 |
| Poaceae | Oryza coarctata | 6 | Oco23G005350, Oco23G005420, Oco23G005910, Oco24G005190 ... |
| Poaceae | Oryza sativa | 4 | LOC_Os12g23940.1, LOC_Os12g23950.1, LOC_Os12g24140.1 ... |
| Poaceae | Thinopyrum elongatum | 7 | Tel1E01G627300, Tel3E01G055300, Tel3E01G055400 ... |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG047000, gene_TRIDC1AG055740 ... |
| Poaceae | Triticum aestivum | 12 | TraesCS1A02G315100.1.cds1, TraesCS1B02G327000.1.cds1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-21376, nbis-gene-40118 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g10509 |