Basic Information
Locus ID:
Zma_g10450
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr06 | 10326507 | 10327508 | - | Zma_g10450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 36,788.26 Da | 42.11 | 65.65 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 56 | 149 | 4.71E-8 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 51 | 166 | 1.3E-9 | IPR015300 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_023157172.1 | uncharacterized protein LOC111590608 [Zea mays] | 0 |
| TrEMBL | K3XRW9 | TF-B3 domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 10 | AH02.2296, AH02.3133, AH05.560, AH05.561, BH02.2404, BH05.3 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_1AG0021040, gene-QOZ80_1AG0024550 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0219140.1.CDS1 ... |
| Poaceae | Oryza coarctata | 4 | Oco03G008100, Oco09G004980, Oco10G005030, Oco16G005390 |
| Poaceae | Oryza sativa | 2 | LOC_Os05g14770.1, LOC_Os08g18060.1 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_02G015600, gene-BS78_02G016500 ... |
| Poaceae | Sporobolus alterniflorus | 8 | Chr02G015480, Chr03G009010, Chr05G018390, Chr05G023330 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G028700, Tel7E01G746400 |
| Poaceae | Triticum aestivum | 17 | TraesCS2A02G265200.1.cds1, TraesCS2D02G258300.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb037340_P001, Zm00001eb153680_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-17899, nbis-gene-17900, nbis-gene-17906 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g10450, Zma_g27902 |