Basic Information
Locus ID:
Zma_g10280
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
JAB/MPN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr06 | 6319064 | 6325605 | + | Zma_g10280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 56,794.80 Da | 46.39 | 83.04 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 331 | 505 | 1.65791E-102 | IPR044098 |
| Pfam | PF08969 | USP8 dimerisation domain | 14 | 101 | 3.0E-9 | IPR015063 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 328 | 434 | 2.1E-17 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 331 | 461 | 6.28E-19 | - |
| Gene3D | G3DSA:1.20.58.80 | - | 5 | 126 | 5.1E-27 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 321 | 507 | 2.3E-71 | - |
| SMART | SM00232 | pad1_6 | 330 | 458 | 9.7E-13 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 330 | 461 | 25.319035 | IPR037518 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 255 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48790.1 | associated molecule with the SH3 domain of STAM 1. | 0 |
| RefSeq | XP_004968695.1 | AMSH-like ubiquitin thioesterase 3 [Setaria italica] | 0 |
| Q5PNU3 | AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana OX=3702 GN=AMSH3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9UBA4 | MPN domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_30629 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology