HalophFGD

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Basic Information
Locus ID: Zma_g10227
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr06 5761611 5763752 - Zma_g10227
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.91 36,819.92 Da 47.46 57.23 -0.90
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13963 Transposase-associated domain 4 83 5.9E-24 IPR029480
MobiDBLite mobidb-lite consensus disorder prediction 306 329 - -
MobiDBLite mobidb-lite consensus disorder prediction 265 284 - -
Coils Coil Coil 211 231 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052156849.1 uncharacterized protein LOC127774613 isoform X2 [Oryza glaberrima] 0
TrEMBL A0A811S0M9 Transpos_assoc domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS59973 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 21 AH03.846, AH06.2807, AH08.1580, AH09.657, BH01.2974, BH06.72 ...
BH02.1779, BH02.1782, BH04.2193, BH05.2893, BH05.3561, BH07.1318, BH07.1690, BH07.979, BH08.1228, CH01.5221, CH03.4621, CH05.1155, CH05.3445, CH08.1093, CH09.509
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_8BG0662420
Poaceae Lolium multiflorum 1 gene-QYE76_041727
Poaceae Oryza coarctata 6 Oco04G010980, Oco07G006700, Oco09G013450, Oco10G000820 ...
Oco11G009560, Oco19G006070
Poaceae Oryza sativa 3 LOC_Os05g36240.1, LOC_Os07g05840.1, LOC_Os11g41770.1
Poaceae Puccinellia tenuiflora 1 Pt_Chr0205778
Poaceae Sporobolus alterniflorus 2 Chr17G011710, Chr29G008210
Poaceae Triticum dicoccoides 1 gene_TRIDC5AG051480
Poaceae Zoysia japonica 2 nbis-gene-28977, nbis-gene-48363
Poaceae Zoysia macrostachya 5 Zma_g10227, Zma_g23699, Zma_g23855, Zma_g32507, Zma_g32508
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.