Basic Information
Locus ID:
Thhalv10029484m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
protein ubiquitination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 3574271 | 3574979 | - | Thhalv10029484m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.70 | 23,560.64 Da | 29.97 | 78.78 | -0.07 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39590.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_006396668.1 | F-box/kelch-repeat protein At4g39590 [Eutrema salsugineum] | 0 |
| Q1PE10 | F-box/kelch-repeat protein At4g39590 OS=Arabidopsis thaliana OX=3702 GN=At4g39590 PE=2 SV=1 | 0 | |
| TrEMBL | V4L3P7 | F-box/kelch-repeat protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10029484mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G61540.1, AT4G39590.1 |
| Brassicaceae | Eutrema salsugineum | 4 | Thhalv10027031m.g.v1.0, Thhalv10029197m.g.v1.0 ... |
| Brassicaceae | Brassica nigra | 3 | BniB05g000430.2N, BniB05g000440.2N, BniB05g000450.2N |