Basic Information
Locus ID:
Thhalv10029478m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 10989923 | 10991068 | + | Thhalv10029478m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 43,340.04 Da | 53.14 | 75.64 | -0.23 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32660.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_006397212.2 | LOW QUALITY PROTEIN: putative F-box protein At1g32660 [Eutrema salsugineum] | 0 |
| Q9LPJ7 | Putative F-box protein At1g32660 OS=Arabidopsis thaliana OX=3702 GN=At1g32660 PE=4 SV=1 | 0 | |
| TrEMBL | V4KL85 | FBA_3 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10029478mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G30790.1, AT1G32660.1 |
| Brassicaceae | Eutrema salsugineum | 8 | Thhalv10002533m.g.v1.0, Thhalv10007869m.g.v1.0 ... |
| Brassicaceae | Brassica nigra | 7 | BniB03g034380.2N, BniB03g069480.2N, BniB05g000090.2N ... |
| Plantaginaceae | Plantago ovata | 1 | Pov_00008690 |