Basic Information
Locus ID:
Thhalv10029431m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 6834720 | 6835951 | + | Thhalv10029431m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 29,294.69 Da | 42.46 | 85.64 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 227 | 263 | 1.58339E-16 | - |
| Pfam | PF19026 | HYPK UBA domain | 224 | 263 | 6.4E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 120 | 174 | 1.8E-22 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 225 | 262 | 4.7E-18 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 126 | 179 | 1.9E-30 | IPR038187 |
| SMART | SM01407 | NAC_2 | 120 | 176 | 2.5E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 117 | 182 | 17.545561 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 128 | - | - |
| Coils | Coil | Coil | 62 | 83 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10480.2 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_024009846.1 | nascent polypeptide-associated complex subunit alpha-like protein 4 isoform X1 [Eutrema salsugineum] | 0 |
| Q9SZY1 | Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g10480 PE=1 SV=1 | 0 | |
| TrEMBL | V4N0L0 | NAC-A/B domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10029431mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology