Basic Information
Locus ID:
Thhalv10029392m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 3862083 | 3862628 | - | Thhalv10029392m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.32 | 20,910.05 Da | 31.31 | 97.90 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15740.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_006396860.1 | uncharacterized protein LOC18014454 [Eutrema salsugineum] | 0 |
| TrEMBL | V4LEU6 | Zpr1 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10029392mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G14970.1, AT3G15740.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029392m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g05720.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g057340.2N |