Basic Information
Locus ID:
Thhalv10029368m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
LicD family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 2953913 | 2955085 | - | Thhalv10029368m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 34,582.25 Da | 55.80 | 79.83 | -0.23 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43440.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_010512879.1 | PREDICTED: F-box/kelch-repeat protein At2g43270-like [Camelina sativa] | 0 |
| A8MS20 | F-box protein At2g43440 OS=Arabidopsis thaliana OX=3702 GN=At2g43440 PE=2 SV=1 | 0 | |
| TrEMBL | V4KK16 | FBA_1 domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10029368mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 8 | AT1G49790.2, AT2G30615.1, AT2G42955.1, AT2G43260.1 ... |
| Brassicaceae | Eutrema salsugineum | 8 | Thhalv10001524m.g.v1.0, Thhalv10005447m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g31660.v2.2 |
| Brassicaceae | Brassica nigra | 11 | BniB01g002760.2N, BniB01g011350.2N, BniB02g072460.2N ... |