Basic Information
Locus ID:
Thhalv10029135m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Translocase of chloroplast 159
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 1203138 | 1205795 | + | Thhalv10029135m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 96,582.65 Da | 49.75 | 82.99 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 232 | 476 | 1.22307E-119 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 615 | 878 | 2.0E-94 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 260 | 393 | 1.4E-21 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 254 | 397 | 3.25E-17 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 233 | 477 | 1.6E-53 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 150 | 880 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 256 | 489 | 27.732899 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 619 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 106 | - | - |
| Coils | Coil | Coil | 571 | 591 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_006396459.2 | translocase of chloroplast 159, chloroplastic [Eutrema salsugineum] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | V4L6H7 | AIG1-type G domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10029135mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology