Basic Information
Locus ID:
Thhalv10029082m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 5598307 | 5598793 | - | Thhalv10029082m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 12,456.26 Da | 60.72 | 109.09 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 1 | 93 | 4.9E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 94 | 7.69E-37 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 109 | 1.3E-38 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 110 | 24.668789 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 12 | 24 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70530.2 | - | 0 |
| RefSeq | XP_006390874.1 | cysteine-rich receptor-like protein kinase 3 [Eutrema salsugineum] | 0 |
| Q9CAL2 | Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=2 SV=1 | 0 | |
| TrEMBL | V4N0B9 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10029082mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005213 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0017500 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30071510, pistato.v30107630 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029082m.g.v1.0 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0879, Ceq04G0498 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g01540 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G159500 |