Basic Information
Locus ID:
Thhalv10028882m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the 14-3-3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 11334784 | 11337194 | - | Thhalv10028882m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.77 | 30,555.00 Da | 48.86 | 83.75 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 18 | 242 | 4.2E-105 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 11 | 244 | 4.06E-106 | IPR036815 |
| Gene3D | G3DSA:1.20.190.20 | - | 2 | 256 | 1.8E-133 | IPR036815 |
| SMART | SM00101 | 1433_4 | 12 | 254 | 4.7E-200 | IPR023410 |
| PIRSF | PIRSF000868 | 14-3-3 | 7 | 254 | 2.6E-117 | IPR000308 |
| ProSitePatterns | PS00797 | 14-3-3 proteins signature 2. | 224 | 243 | - | IPR023409 |
| ProSitePatterns | PS00796 | 14-3-3 proteins signature 1. | 52 | 62 | - | IPR023409 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 46 | 75 | 9.7E-87 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 215 | 244 | 9.7E-87 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 95 | 119 | 9.7E-87 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 188 | 214 | 9.7E-87 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 126 | 148 | 9.7E-87 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 161 | 187 | 9.7E-87 | IPR000308 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 272 | - | - |
| Coils | Coil | Coil | 18 | 45 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G09000.1 | general regulatory factor 1. Encodes a 14-3-3 gene, designated GRF1 chi (for general regulatory factor1-G-box factor 14-3-3 homolog isoform chi). The major native forms of 14-3-3s are homo- and hetero-dimers, the biological functions of which are to interact physically with specific client proteins and thereby effect a change in the client. As a result, 14-3-3s are involved in a vast array of processes such as the response to stress, cell-cycle control, and apoptosis, serving as adapters, activators, and repressors. There are currently 133 full-length sequences available. | 0 |
| RefSeq | XP_006397240.1 | 14-3-3-like protein GF14 chi [Eutrema salsugineum] | 0 |
| P42643 | 14-3-3-like protein GF14 chi OS=Arabidopsis thaliana OX=3702 GN=GRF1 PE=1 SV=3 | 0 | |
| TrEMBL | Q8S2S9 | 14-3-3-like protein OS=Eutrema halophilum OX=98038 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology