Basic Information
Locus ID:
Thhalv10028626m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 405521 | 407646 | + | Thhalv10028626m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 54,755.32 Da | 59.71 | 88.93 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 73 | 146 | 1.90719E-12 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 187 | 279 | 1.2E-8 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 74 | 160 | 8.4E-12 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 362 | 474 | 3.6E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 74 | 160 | 7.14E-12 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 198 | 302 | 1.9E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 4 | 197 | 2.2E-16 | IPR011333 |
| SMART | SM00225 | BTB_4 | 17 | 163 | 1.4E-9 | IPR000210 |
| SMART | SM00875 | BACK_2 | 176 | 281 | 5.8E-4 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 73 | 132 | 13.053388 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 62 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G01160.2 | - | 0 |
| RefSeq | XP_024009902.1 | BTB/POZ domain-containing protein At4g01160 [Eutrema salsugineum] | 0 |
| O04615 | BTB/POZ domain-containing protein At4g01160 OS=Arabidopsis thaliana OX=3702 GN=At4g01160 PE=3 SV=1 | 0 | |
| TrEMBL | V4MYS9 | BTB domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10028626mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology