Basic Information
Locus ID:
Thhalv10028618m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
CPK31
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 2327372 | 2330514 | + | Thhalv10028618m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 54,621.66 Da | 37.09 | 85.40 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 29 | 291 | 1.2241E-108 | - |
| CDD | cd00051 | EFh | 339 | 400 | 3.49512E-17 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 32 | 292 | 5.0E-65 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 409 | 470 | 4.2E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 338 | 399 | 1.0E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 330 | 470 | 1.64E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 35 | 295 | 4.92E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 300 | 473 | 9.6E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 119 | 299 | 5.2E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 118 | 1.8E-23 | - |
| SMART | SM00054 | efh_1 | 338 | 366 | 4.0E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 374 | 402 | 9.5E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 445 | 473 | 5.3E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 410 | 438 | 3.9E-4 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 31 | 292 | 42.477631 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 370 | 405 | 12.477041 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 406 | 441 | 15.322372 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 334 | 369 | 13.564962 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 442 | 476 | 11.138062 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 347 | 359 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 383 | 395 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 454 | 466 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 419 | 431 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04695.1 | calcium-dependent protein kinase 31. member of Calcium Dependent Protein Kinase. Involved in response to salicylic acid. | 0 |
| RefSeq | XP_006396675.1 | calcium-dependent protein kinase 31 [Eutrema salsugineum] | 0 |
| Q9S9V0 | Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana OX=3702 GN=CPK31 PE=2 SV=2 | 0 | |
| TrEMBL | V4LEE1 | Calcium-dependent protein kinase 24 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10028618mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Thhalv10028618m.g.v1.0.