Basic Information
Locus ID:
Thhalv10028599m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 1251713 | 1253516 | + | Thhalv10028599m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 55,686.55 Da | 37.37 | 85.88 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 175 | 442 | 1.29217E-100 | - |
| Pfam | PF00069 | Protein kinase domain | 170 | 439 | 6.8E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 148 | 442 | 1.25E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 151 | 244 | 4.6E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 245 | 456 | 5.2E-62 | - |
| SMART | SM00220 | serkin_6 | 169 | 441 | 1.1E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 169 | 447 | 38.265697 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 292 | 304 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 175 | 197 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 483 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02630.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006396477.1 | probable serine/threonine-protein kinase At1g01540 [Eutrema salsugineum] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | V4KJ95 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10028599mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology