Basic Information
Locus ID:
Thhalv10028477m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 1681264 | 1685341 | - | Thhalv10028477m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 76,711.38 Da | 47.76 | 90.88 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 686 | 2.3E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 9.7E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 245 | 5.53E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 390 | 686 | 3.23E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 489 | 4.4E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 266 | 2.7E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 699 | 1.9E-50 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 412 | 690 | 34.732197 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 318 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_006396566.2 | protein STRUBBELIG-RECEPTOR FAMILY 3 [Eutrema salsugineum] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3GQJ3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Noccaea caerulescens OX=107243 GN=LC_TR12343_c1_g1_i1_g.43031 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology