Basic Information
Locus ID:
Thhalv10028372m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Kinase interacting
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 1285040 | 1289721 | - | Thhalv10028372m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 125,958.19 Da | 51.26 | 83.17 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07765 | KIP1-like protein | 14 | 87 | 4.9E-36 | IPR011684 |
| SUPERFAMILY | SSF57997 | Tropomyosin | 365 | 581 | 5.56E-5 | - |
| SUPERFAMILY | SSF57997 | Tropomyosin | 194 | 425 | 2.45E-5 | - |
| Gene3D | G3DSA:1.10.287.1490 | - | 197 | 334 | 6.3E-6 | - |
| ProSiteProfiles | PS51774 | Networked (NET) actin-binding (NAB) domain profile. | 13 | 93 | 48.812195 | IPR011684 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1002 | 1022 | - | - |
| Coils | Coil | Coil | 336 | 391 | - | - |
| Coils | Coil | Coil | 308 | 328 | - | - |
| Coils | Coil | Coil | 646 | 694 | - | - |
| Coils | Coil | Coil | 726 | 746 | - | - |
| Coils | Coil | Coil | 976 | 1003 | - | - |
| Coils | Coil | Coil | 207 | 272 | - | - |
| Coils | Coil | Coil | 518 | 545 | - | - |
| Coils | Coil | Coil | 611 | 631 | - | - |
| Coils | Coil | Coil | 940 | 974 | - | - |
| Coils | Coil | Coil | 569 | 589 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02710.1 | Kinase interacting (KIP1-like) family protein. | 0 |
| RefSeq | XP_024009867.1 | protein NETWORKED 1C [Eutrema salsugineum] | 0 |
| Q9ZQX8 | Protein NETWORKED 1C OS=Arabidopsis thaliana OX=3702 GN=NET1C PE=3 SV=1 | 0 | |
| TrEMBL | V4L6K4 | NAB domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10028372mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology