Basic Information
Locus ID:
Thhalv10028361m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Translocase of chloroplast 159
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3 | 1212222 | 1217622 | + | Thhalv10028361m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 160,337.70 Da | 42.42 | 78.91 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 823 | 1076 | 5.2715E-129 | - |
| Pfam | PF04548 | AIG1 family | 854 | 996 | 2.4E-22 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1223 | 1487 | 3.5E-126 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 848 | 987 | 5.81E-16 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 831 | 1085 | 3.3E-54 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 737 | 1501 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 851 | 1085 | 29.804375 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 661 | 677 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 677 | - | - |
| Coils | Coil | Coil | 164 | 184 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_024010045.1 | translocase of chloroplast 159, chloroplastic [Eutrema salsugineum] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | V4KJ85 | AIG1-type G domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10028361mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology