Basic Information
Locus ID:
Thhalv10028141m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_14 | 5073492 | 5074293 | - | Thhalv10028141m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.11 | 29,312.60 Da | 41.12 | 102.02 | -0.19 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66830.1 | F-box family protein with a domain of unknown function (DUF295). | 0 |
| RefSeq | XP_024014428.1 | LOW QUALITY PROTEIN: putative F-box protein At5g66830 [Eutrema salsugineum] | 0 |
| Q9FKZ7 | Putative F-box protein At5g66830 OS=Arabidopsis thaliana OX=3702 GN=At5g66830 PE=4 SV=1 | 0 | |
| TrEMBL | V4L9R7 | DUF295 domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10028141mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 36 | AT1G10110.1, AT1G27540.1, AT1G27550.1, AT1G27580.1 ... |
| Brassicaceae | Eutrema salsugineum | 24 | Thhalv10002155m.g.v1.0, Thhalv10003011m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp3g02700.v2.2, Sp3g24140.v2.2, Sp3g33180.v2.2 ... |
| Brassicaceae | Brassica nigra | 32 | BniB01g011090.2N, BniB02g015840.2N, BniB02g015860.2N ... |