Basic Information
Locus ID:
Thhalv10027816m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_14 | 3325435 | 3327992 | - | Thhalv10027816m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 40,001.79 Da | 44.66 | 87.39 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 32 | 286 | 1.33407E-106 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 29 | 286 | 4.4E-57 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 317 | 5.53E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 106 | 8.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 313 | 1.7E-51 | - |
| SMART | SM00220 | serkin_6 | 26 | 290 | 3.0E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 290 | 43.099525 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 53 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 257 | 279 | 6.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 140 | 158 | 6.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 214 | 236 | 6.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 102 | 115 | 6.9E-11 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006405481.1 | serine/threonine-protein kinase STY13 [Eutrema salsugineum] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | V4LSY0 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027816mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology