Basic Information
Locus ID:
Thhalv10027773m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_14 | 2666059 | 2667752 | + | Thhalv10027773m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 48,448.95 Da | 53.20 | 85.40 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 13 | 88 | 9.25285E-19 | - |
| Pfam | PF02214 | BTB/POZ domain | 13 | 97 | 3.0E-13 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 11 | 96 | 7.85E-16 | IPR011333 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 131 | 370 | 1.49E-10 | IPR011047 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 7 | 108 | 8.4E-18 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 129 | 437 | 2.4E-7 | IPR015943 |
| SMART | SM00225 | BTB_4 | 11 | 105 | 2.9E-4 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_024014637.1 | LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At5g41330 [Eutrema salsugineum] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | V4NKB7 | BTB domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027773mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology