Basic Information
Locus ID:
Thhalv10027753m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
SOS2
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_14 | 3735660 | 3739239 | + | Thhalv10027753m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.26 | 51,973.65 Da | 42.32 | 89.61 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 322 | 437 | 1.43367E-44 | - |
| Pfam | PF00069 | Protein kinase domain | 22 | 275 | 2.1E-73 | IPR000719 |
| Pfam | PF03822 | NAF domain | 318 | 375 | 1.1E-17 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 276 | 2.16E-92 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 102 | 282 | 2.5E-61 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 315 | 441 | 4.9E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 12 | 101 | 1.6E-35 | - |
| SMART | SM00220 | serkin_6 | 22 | 275 | 1.0E-105 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 22 | 275 | 51.735401 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 316 | 340 | 12.536119 | IPR018451 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 141 | 153 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 28 | 60 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35410.1 | Protein kinase superfamily protein. encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition | 0 |
| RefSeq | XP_006405548.1 | CBL-interacting serine/threonine-protein kinase 24 [Eutrema salsugineum] | 0 |
| Q9LDI3 | CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CIPK24 PE=1 SV=1 | 0 | |
| TrEMBL | V4NKW2 | non-specific serine/threonine protein kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027753mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology