Basic Information
Locus ID:
Thhalv10027628m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_14 | 9298623 | 9305600 | + | Thhalv10027628m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 119,066.76 Da | 47.04 | 79.00 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 473 | 793 | 1.4E-102 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 38 | 136 | 8.0E-9 | IPR001715 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 467 | 832 | 7.71E-117 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 38 | 134 | 7.59E-15 | IPR036872 |
| Gene3D | G3DSA:1.10.418.10 | - | 27 | 140 | 1.3E-13 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 407 | 797 | 3.4E-127 | IPR036961 |
| SMART | SM00033 | ch_5 | 36 | 132 | 2.7E-5 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 465 | 803 | 1.2E-151 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 34 | 137 | 16.201239 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 467 | 795 | 109.474579 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 695 | 706 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 696 | 714 | 2.7E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 665 | 682 | 2.7E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 542 | 563 | 2.7E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 745 | 766 | 2.7E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1014 | 1059 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1065 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1013 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 850 | 926 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 900 | 926 | - | - |
| Coils | Coil | Coil | 809 | 836 | - | - |
| Coils | Coil | Coil | 295 | 386 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_006405988.1 | kinesin-like protein KIN-14J [Eutrema salsugineum] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | V4NLY9 | Kinesin-4 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027628mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology