Basic Information
Locus ID:
Thhalv10027481m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Contains the following InterPro domains Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro IPR015609), Heat shock protein DnaJ, N-terminal (InterPro IPR001623), Heat shock protein DnaJ (InterPro IPR003095)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 8743628 | 8744260 | - | Thhalv10027481m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 24,075.27 Da | 30.94 | 75.33 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 82 | 135 | 2.05714E-17 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 82 | 143 | 7.2E-21 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 75 | 148 | 3.4E-21 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 79 | 192 | 2.2E-22 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 81 | 138 | 1.0E-19 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 82 | 146 | 16.797207 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 117 | 9.2E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 84 | 102 | 9.2E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 118 | 138 | 9.2E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 190 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19590.3 | - | 0 |
| RefSeq | XP_006413958.1 | dnaJ homolog subfamily B member 12 [Eutrema salsugineum] | 0 |
| Q8WW22 | DnaJ homolog subfamily A member 4 OS=Homo sapiens OX=9606 GN=DNAJA4 PE=1 SV=1 | 0 | |
| TrEMBL | V4P747 | J domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027481mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology