Basic Information
Locus ID:
Thhalv10027392m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 1229076 | 1230805 | + | Thhalv10027392m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 53,155.38 Da | 44.44 | 94.92 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 182 | 326 | 2.6E-25 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 328 | 421 | 2.0E-5 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 156 | 432 | 2.32E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 111 | 7.14E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 113 | 6.3E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 327 | 449 | 2.6E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 139 | 255 | 8.9E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 256 | 326 | 6.2E-17 | - |
| SMART | SM00220 | serkin_6 | 178 | 431 | 8.5E-18 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 178 | 468 | 23.820749 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 184 | 206 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 305 | 317 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24650.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024008045.1 | receptor-like kinase TMK2 [Eutrema salsugineum] | 0 |
| Q9FYK0 | Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1 | 0 | |
| TrEMBL | V4LRZ2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027392mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology