Basic Information
Locus ID:
Thhalv10027069m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Contains the following InterPro domains Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro IPR015609), Heat shock protein DnaJ, N-terminal (InterPro IPR001623), Heat shock protein DnaJ (InterPro IPR003095)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 8748639 | 8749517 | - | Thhalv10027069m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 33,056.79 Da | 38.68 | 59.52 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 70 | 123 | 3.99227E-19 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 70 | 131 | 6.0E-21 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 68 | 134 | 1.57E-20 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 55 | 158 | 3.4E-23 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 69 | 126 | 2.6E-19 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 70 | 134 | 16.43207 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 90 | 105 | 1.1E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 72 | 90 | 1.1E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 106 | 126 | 1.1E-11 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 166 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37440.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_006413960.1 | J protein JJJ2 [Eutrema salsugineum] | 0 |
| Q24133 | DnaJ protein homolog 1 OS=Drosophila melanogaster OX=7227 GN=DnaJ-1 PE=1 SV=3 | 0 | |
| TrEMBL | V4MQL4 | J domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027069mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology