Basic Information
Locus ID:
Thhalv10026931m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Thioredoxin-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 3700680 | 3705991 | + | Thhalv10026931m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 129,914.71 Da | 49.24 | 81.58 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03009 | TryX_like_TryX_NRX | 27 | 155 | 8.47915E-58 | - |
| CDD | cd01989 | STK_N | 406 | 561 | 6.14062E-59 | - |
| CDD | cd03009 | TryX_like_TryX_NRX | 186 | 316 | 4.02407E-63 | - |
| CDD | cd14066 | STKc_IRAK | 866 | 1126 | 3.16654E-83 | - |
| Pfam | PF13905 | Thioredoxin-like | 43 | 128 | 2.0E-21 | IPR012336 |
| Pfam | PF13905 | Thioredoxin-like | 203 | 295 | 2.5E-21 | IPR012336 |
| Pfam | PF00582 | Universal stress protein family | 407 | 535 | 2.9E-8 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 861 | 1117 | 5.7E-39 | IPR000719 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 188 | 300 | 1.52E-16 | IPR036249 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 843 | 1119 | 3.83E-68 | IPR011009 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 32 | 146 | 5.98E-15 | IPR036249 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 407 | 536 | 3.68E-9 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 335 | 381 | 4.97E-8 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 21 | 159 | 4.4E-26 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 177 | 317 | 1.3E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 933 | 1148 | 6.1E-50 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 406 | 558 | 4.0E-11 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 839 | 932 | 8.7E-26 | - |
| SMART | SM00220 | serkin_6 | 860 | 1123 | 4.3E-28 | IPR000719 |
| ProSiteProfiles | PS51352 | Thioredoxin domain profile. | 17 | 171 | 9.768385 | IPR013766 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 860 | 1123 | 35.551968 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 978 | 990 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 575 | 603 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 654 | 689 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1130 | 1155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 575 | 617 | - | - |
| Coils | Coil | Coil | 764 | 809 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_024005430.1 | U-box domain-containing protein 52 [Eutrema salsugineum] | 0 |
| Q8VZQ0 | Probable nucleoredoxin 3 OS=Arabidopsis thaliana OX=3702 GN=At4g31240 PE=2 SV=1 | 0 | |
| TrEMBL | V4MMN7 | Thioredoxin domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10026931mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology