Basic Information
Locus ID:
Thhalv10026894m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
F-box protein At4g22030
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 7731543 | 7734967 | - | Thhalv10026894m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 73,473.64 Da | 44.23 | 92.96 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 411 | 453 | 3.9E-8 | IPR001810 |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 564 | 612 | 3.8E-6 | IPR005174 |
| Pfam | PF14476 | Petal formation-expressed | 84 | 390 | 5.5E-136 | IPR027949 |
| SUPERFAMILY | SSF81383 | F-box domain | 401 | 458 | 2.22E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 412 | 452 | 1.0E-8 | - |
| SMART | SM00256 | fbox_2 | 416 | 456 | 1.7E-5 | IPR001810 |
| Coils | Coil | Coil | 258 | 278 | - | - |
| Coils | Coil | Coil | 174 | 194 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22030.1 | F-box family protein with a domain of unknown function (DUF295). | 0 |
| RefSeq | XP_024005437.1 | probable F-box protein At4g22030 [Eutrema salsugineum] | 0 |
| O65451 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE=4 SV=1 | 0 | |
| TrEMBL | V4MQ11 | F-box domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10026894mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology