HalophFGD

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Basic Information
Locus ID: Thhalv10026843m.g.v1.0
Species & Taxonomic ID: Eutrema salsugineum & 72664
Genome Assembly: GCF_000478725.1
Description: Phytosulfokine precursor protein (PSK)
Maps and Mapping Data
Chromosome Start End Strand ID
scaffold_1 927688 928052 + Thhalv10026843m.g.v1.0
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.55 9,549.93 Da 51.50 86.23 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF06404 Phytosulfokine precursor protein (PSK) 23 84 2.2E-10 IPR009438
Gene Ontology
Biological Process:
GO:0008283 (cell population proliferation)
Molecular Function:
GO:0008083 (growth factor activity)
Cellular Component:
GO:0005576 (extracellular region)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G37720.1 phytosulfokine 6 precursor. Probable phytosulfokines 6 precursor, coding for a unique plant peptide growth factor. 0
RefSeq XP_006411857.1 putative phytosulfokines 4 [Eutrema salsugineum] 0
Swiss-Prot Q9SZG4 Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1 0
TrEMBL V4LRS4 Phytosulfokine OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10026843mg PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 8 jg16480, jg17343, jg26300, jg28589, jg30195, jg31974, jg8174 ...
jg39917
Aizoaceae Mesembryanthemum crystallinum 4 gene_14411, gene_21244, gene_21475, gene_24019
Amaranthaceae Atriplex hortensis 5 Ah011439, Ah027509, Ah030902, Ah036797, Ah039502
Amaranthaceae Beta vulgaris 3 BVRB_1g014760, BVRB_6g128430, BVRB_7g160220
Amaranthaceae Salicornia bigelovii 8 Sbi_jg11884, Sbi_jg13205, Sbi_jg27442, Sbi_jg33177 ...
Sbi_jg39641, Sbi_jg46821, Sbi_jg52591, Sbi_jg54694
Amaranthaceae Salicornia europaea 5 Seu_jg14678, Seu_jg21123, Seu_jg27919, Seu_jg7907 ...
Seu_jg9206
Amaranthaceae Suaeda aralocaspica 4 GOSA_00005048, GOSA_00010082, GOSA_00012288, GOSA_00013214
Amaranthaceae Suaeda glauca 10 Sgl12556, Sgl17829, Sgl34565, Sgl39979, Sgl55316, Sgl60572 ...
Sgl60663, Sgl71394, Sgl74983, Sgl80245
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000002455, gene:ENSEOMG00000028289 ...
gene:ENSEOMG00000033950, gene:ENSEOMG00000038678, gene:ENSEOMG00000048031, gene:ENSEOMG00000052607
Amaranthaceae Chenopodium quinoa 8 CQ.Regalona.r1.1AG0020890, CQ.Regalona.r1.1BG0007320 ...
CQ.Regalona.r1.6AG0016160, CQ.Regalona.r1.6AG0026520, CQ.Regalona.r1.7AG0019660, CQ.Regalona.r1.7BG0022300, CQ.Regalona.r1.9AG0010830, CQ.Regalona.r1.9BG0011560
Anacardiaceae Pistacia vera 1 pistato.v30010920
Apiaceae Apium graveolens 5 Ag11G04355, Ag3G00067, Ag3G00110, Ag4G01159, Ag6G01297
Arecaceae Cocos nucifera 4 COCNU_02G009670, COCNU_15G000260, contig69610073G000010 ...
scaffold076924G000010
Arecaceae Phoenix dactylifera 5 gene-LOC103712283, gene-LOC103713684, gene-LOC103717692 ...
gene-LOC103719854, gene-LOC120112106
Asparagaceae Asparagus officinalis 3 AsparagusV1_02.873.V1.1, AsparagusV1_03.788.V1.1 ...
AsparagusV1_07.3060.V1.1
Asteraceae Flaveria trinervia 8 Ftri13G25154, Ftri14G27430, Ftri16G24836, Ftri17G30563 ...
Ftri18G14278, Ftri18G24896, Ftri18G32910, Ftri4G15130
Brassicaceae Arabidopsis thaliana 7 AT1G13590.1, AT2G22860.1, AT2G22942.1, AT3G44735.1 ...
AT3G49780.1, AT4G37720.1, AT5G65870.1
Brassicaceae Eutrema salsugineum 8 Thhalv10000380m.g.v1.0, Thhalv10000381m.g.v1.0 ...
Thhalv10002908m.g.v1.0, Thhalv10005224m.g.v1.0, Thhalv10009205m.g.v1.0, Thhalv10010875m.g.v1.0, Thhalv10015130m.g.v1.0, Thhalv10026843m.g.v1.0
Brassicaceae Schrenkiella parvula 8 Sp1g11970.v2.2, Sp2g28960.v2.2, Sp4g01910.v2.2 ...
Sp4g01960.v2.2, Sp5g12310.v2.2, Sp5g16440.v2.2, Sp6g39010.v2.2, Sp7g35370.v2.2
Brassicaceae Brassica nigra 13 BniB01g020970.2N, BniB02g008530.2N, BniB02g019690.2N ...
BniB02g056830.2N, BniB02g088760.2N, BniB03g010010.2N, BniB03g014410.2N, BniB04g000590.2N, BniB05g047860.2N, BniB05g051280.2N, BniB06g014170.2N, BniB06g038310.2N, BniB08g063500.2N
Casuarinaceae Casuarina equisetifolia 5 Ceq02G1492, Ceq05G0025, Ceq05G0029, Ceq05G1727, Ceq09G0469
Casuarinaceae Casuarina glauca 4 Cgl02G1548, Cgl05G0026, Cgl05G1729, Cgl09G0505
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno06g00660, gene.Cymno07g10660, gene.Cymno10g09040
Hydrocharitaceae Thalassia testudinum 4 gene.Thate02g16360, gene.Thate02g30960, gene.Thate06g13670 ...
gene.Thate08g21300
Malvaceae Hibiscus hamabo Siebold & Zucc. 5 nbisL1-mrna-10086, nbisL1-mrna-10116, nbisL1-mrna-10577 ...
nbisL1-mrna-5199, nbisL1-mrna-8568
Nitrariaceae Nitraria sibirica 6 evm.TU.LG01.2130, evm.TU.LG02.2591, evm.TU.LG03.452 ...
evm.TU.LG06.313, evm.TU.LG08.631, evm.TU.LG09.759
Plantaginaceae Plantago ovata 4 Pov_00004911, Pov_00012076, Pov_00015859, Pov_00023754
Plumbaginaceae Limonium bicolor 5 Lb1G05452, Lb3G16055, Lb3G19955, Lb7G33000, Lb7G33003
Poaceae Echinochloa crus-galli 18 AH01.4451, AH03.151, AH04.1628, AH04.280, AH05.190, AH05.191 ...
BH03.187, BH04.1650, BH04.268, BH05.218, BH05.220, CH01.5061, CH03.242, CH04.1870, CH04.287, CH05.275, CH05.276, Contig192.91
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_3AG0239670, gene-QOZ80_3BG0288350 ...
gene-QOZ80_5AG0381370, gene-QOZ80_5BG0428420, gene-QOZ80_9AG0674550, gene-QOZ80_9BG0698350
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.2HG0154460.1, HORVU.MOREX.r3.4HG0394720.1 ...
HORVU.MOREX.r3.5HG0459580.1
Poaceae Lolium multiflorum 3 gene-QYE76_003024, gene-QYE76_003026, gene-QYE76_003158
Poaceae Oryza coarctata 12 Oco05G007300, Oco05G020090, Oco06G007550, Oco06G020870 ...
Oco13G000840, Oco14G000910, Oco20G000080, Oco21G001110, Oco22G001940, Oco22G008400, Oco23G001750, Oco24G001280
Poaceae Oryza sativa 6 LOC_Os03g12990.1, LOC_Os03g47230.1, LOC_Os07g03200.1 ...
LOC_Os11g05190.1, LOC_Os11g35310.1, LOC_Os12g05260.1
Poaceae Paspalum vaginatum 5 gene-BS78_01G430600, gene-BS78_02G022200 ...
gene-BS78_05G047600, gene-BS78_05G168100, gene-BS78_08G022900
Poaceae Puccinellia tenuiflora 7 Pt_Chr0101837, Pt_Chr0101871, Pt_Chr0103118, Pt_Chr0303450 ...
Pt_Chr0303469, Pt_Chr0703128, Pt_Chr0703178
Poaceae Sporobolus alterniflorus 12 Chr01G028430, Chr07G021380, Chr0G005140, Chr12G011030 ...
Chr16G009380, Chr17G008420, Chr19G012060, Chr19G018400, Chr24G002000, Chr27G003890, Chr31G000940, Chr31G006750
Poaceae Thinopyrum elongatum 4 Tel2E01G471400, Tel4E01G204500, Tel4E01G408000 ...
Tel5E01G235800
Poaceae Triticum dicoccoides 8 gene_TRIDC2AG038200, gene_TRIDC2BG039990 ...
gene_TRIDC4AG009190, gene_TRIDC4AG029860, gene_TRIDC4BG021300, gene_TRIDC4BG041650, gene_TRIDC5AG022970, gene_TRIDC5BG023090
Poaceae Triticum aestivum 12 TraesCS2A02G267200.1, TraesCS2B02G275300.2 ...
TraesCS2D02G256900.1, TraesCS4A02G060600.1, TraesCS4A02G186800.1.cds1, TraesCS4B02G131900.1, TraesCS4B02G236000.1, TraesCS4D02G126700.1, TraesCS4D02G237400.1, TraesCS5A02G130400.1, TraesCS5B02G130300.1, TraesCS5D02G137900.1
Poaceae Zea mays 7 Zm00001eb114080_P001, Zm00001eb139570_P001 ...
Zm00001eb196710_P001, Zm00001eb299250_P001, Zm00001eb399450_P001, Zm00001eb406460_P001, Zm00001eb406480_P002
Poaceae Zoysia japonica 8 nbis-gene-2403, nbis-gene-25654, nbis-gene-27048 ...
nbis-gene-35841, nbis-gene-4003, nbis-gene-44240, nbis-gene-45766, nbis-gene-46367
Poaceae Zoysia macrostachya 9 Zma_g1728, Zma_g17562, Zma_g18070, Zma_g18411, Zma_g18965 ...
Zma_g24731, Zma_g25494, Zma_g4107, Zma_g5915
Portulacaceae Portulaca oleracea 5 evm.TU.LG05.63, evm.TU.LG08.1025, evm.TU.LG11.1173 ...
evm.TU.LG22.758, evm.TU.LG25.1271
Posidoniaceae Posidonia oceanica 3 gene.Posoc03g27770, gene.Posoc03g27780, gene.Posoc03g27800
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_1_RagTag.1999, evm.TU.Scaffold_3_RagTag.1184 ...
evm.TU.Scaffold_6_RagTag.1767, evm.TU.Scaffold_7_RagTag.837
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-17391, nbisL1-mrna-19292, nbisL1-mrna-5809 ...
nbisL1-mrna-6140
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-3079, nbisL1-mrna-9420, nbisL1-mrna-9763
Rhizophoraceae Ceriops zippeliana 4 nbisL1-mrna-11997, nbisL1-mrna-22087, nbisL1-mrna-3524 ...
nbisL1-mrna-6670
Rhizophoraceae Kandelia candel 5 evm.TU.utg000002l.647, evm.TU.utg000011l.1074 ...
evm.TU.utg000015l.249, evm.TU.utg000016l.265, evm.TU.utg000016l.477
Rhizophoraceae Kandelia obovata 4 Maker00010342, Maker00015258, Maker00016394, Maker00016862
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-15431, nbisL1-mrna-4152, nbisL1-mrna-4154 ...
nbisL1-mrna-7651
Rhizophoraceae Rhizophora mangle 7 nbisL1-mrna-10089, nbisL1-mrna-13943, nbisL1-mrna-1879 ...
nbisL1-mrna-22162, nbisL1-mrna-22165, nbisL1-mrna-3318, nbisL1-mrna-434
Salicaceae Populus euphratica 6 populus_peu08563, populus_peu20929, populus_peu23755 ...
populus_peu32081, populus_peu36190, populus_peu36772
Solanaceae Lycium barbarum 10 gene-LOC132599475, gene-LOC132600211, gene-LOC132604365 ...
gene-LOC132604417, gene-LOC132605422, gene-LOC132622813, gene-LOC132623183, gene-LOC132623245, gene-LOC132623608, gene-LOC132633650
Solanaceae Solanum chilense 9 SOLCI001085000, SOLCI001085100, SOLCI001117400 ...
SOLCI003780100, SOLCI004140600, SOLCI005923200, SOLCI005998300, SOLCI006144100, SOLCI007079400
Solanaceae Solanum pennellii 7 gene-LOC107001773, gene-LOC107004279, gene-LOC107009364 ...
gene-LOC107010667, gene-LOC107017382, gene-LOC107022546, gene-LOC107030554
Tamaricaceae Reaumuria soongarica 3 gene_1787, gene_8379, gene_8607
Zosteraceae Zostera marina 1 Zosma06g01810.v3.1
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