Basic Information
Locus ID:
Thhalv10026031m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 13771359 | 13773267 | + | Thhalv10026031m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 28,736.85 Da | 50.92 | 62.53 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 17 | 248 | 2.9E-82 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 137 | 238 | 4.32E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 136 | 251 | 1.1E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 139 | 239 | 23.472933 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 14 | 34 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14550.1 | indole-3-acetic acid inducible 14. IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19. | 0 |
| RefSeq | XP_024005251.1 | auxin-responsive protein IAA14 [Eutrema salsugineum] | 0 |
| Q38832 | Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2 | 0 | |
| TrEMBL | V4MHT2 | Auxin-responsive protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10026031mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology