Basic Information
Locus ID:
Thhalv10025450m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
btb and taz domain protein 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 972546 | 974708 | + | Thhalv10025450m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 43,816.21 Da | 61.70 | 77.36 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 172 | 215 | 2.67287E-5 | - |
| CDD | cd18313 | BTB_POZ_BT | 69 | 170 | 4.60201E-59 | - |
| Pfam | PF00651 | BTB/POZ domain | 62 | 169 | 1.7E-11 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 255 | 338 | 8.8E-13 | IPR000197 |
| SUPERFAMILY | SSF54695 | POZ domain | 52 | 166 | 4.32E-14 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 247 | 347 | 7.72E-21 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 172 | 243 | 3.5E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 40 | 171 | 1.1E-18 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 244 | 367 | 5.5E-21 | IPR035898 |
| SMART | SM00551 | TAZ_2 | 247 | 339 | 2.5E-40 | IPR000197 |
| SMART | SM00225 | BTB_4 | 70 | 170 | 1.6E-9 | IPR000210 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 243 | 341 | 9.157879 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 70 | 138 | 10.550865 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37610.1 | BTB and TAZ domain protein 5. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. | 0 |
| RefSeq | XP_006411869.1 | BTB/POZ and TAZ domain-containing protein 5 [Eutrema salsugineum] | 0 |
| Q6EJ98 | BTB/POZ and TAZ domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BT5 PE=1 SV=1 | 0 | |
| TrEMBL | V4MDL9 | BTB domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10025450mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology