Basic Information
Locus ID:
Thhalv10025374m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 3121856 | 3124859 | - | Thhalv10025374m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 46,467.81 Da | 49.07 | 81.62 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 58 | 396 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 71 | 396 | 3.1E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 58 | 398 | 1.82E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 125 | 396 | 1.2E-113 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 151 | 1.2E-113 | - |
| SMART | SM00220 | serkin_6 | 71 | 396 | 7.2E-80 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 71 | 396 | 38.308098 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 192 | 204 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32660.1 | Protein kinase superfamily protein. Encodes protein kinase AME3. | 0 |
| RefSeq | XP_006412444.1 | serine/threonine-protein kinase AFC3 isoform X1 [Eutrema salsugineum] | 0 |
| P51568 | Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana OX=3702 GN=AFC3 PE=1 SV=2 | 0 | |
| TrEMBL | V4MF50 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10025374mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology