Basic Information
Locus ID:
Thhalv10025240m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
CONTAINS InterPro DOMAIN s Targeting for Xklp2 (InterPro IPR009675)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 3279946 | 3283419 | - | Thhalv10025240m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 47,692.83 Da | 39.13 | 59.20 | -1.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 208 | 292 | 8.0E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 181 | - | - |
| Coils | Coil | Coil | 223 | 243 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_006412488.1 | protein WVD2-like 5 isoform X1 [Eutrema salsugineum] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | V4MM99 | TPX2 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10025240mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology