Basic Information
Locus ID:
Thhalv10024933m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 2894700 | 2899369 | - | Thhalv10024933m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 59,938.78 Da | 42.49 | 76.25 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 92 | 466 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 293 | 402 | 1.5E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 95 | 243 | 7.7E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 91 | 449 | 2.02E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 92 | 177 | 3.0E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 421 | 431 | 8.7E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 300 | 420 | 8.7E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 246 | 3.0E-63 | - |
| SMART | SM00220 | serkin_6 | 94 | 402 | 2.1E-99 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 403 | 467 | 4.3E-6 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 403 | 475 | 12.617754 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 94 | 402 | 46.350346 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 100 | 123 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 213 | 225 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_006412394.1 | serine/threonine-protein kinase tricorner [Eutrema salsugineum] | 0 |
| P53894 | Serine/threonine-protein kinase CBK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CBK1 PE=1 SV=1 | 0 | |
| TrEMBL | V4MEZ8 | Serine/threonine-protein kinase tricorner OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024933mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology