Basic Information
Locus ID:
Thhalv10024825m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 14176814 | 14181501 | + | Thhalv10024825m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 63,702.26 Da | 38.89 | 70.42 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 117 | 482 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 437 | 481 | 1.4E-6 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 121 | 418 | 3.4E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 117 | 465 | 1.62E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 203 | 436 | 6.8E-108 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 117 | 447 | 6.8E-108 | - |
| SMART | SM00133 | pkinase_C_6 | 419 | 483 | 4.3E-6 | IPR000961 |
| SMART | SM00220 | serkin_6 | 119 | 418 | 2.9E-102 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 419 | 491 | 13.517456 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 119 | 418 | 46.986374 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 238 | 250 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 125 | 148 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 554 | - | - |
| Coils | Coil | Coil | 68 | 105 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14350.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_024004714.1 | serine/threonine-protein kinase tricorner [Eutrema salsugineum] | 0 |
| Q9Y2H1 | Serine/threonine-protein kinase 38-like OS=Homo sapiens OX=9606 GN=STK38L PE=1 SV=3 | 0 | |
| TrEMBL | V4MSC8 | Serine/threonine-protein kinase tricorner-like OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024825mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology