Basic Information
Locus ID:
Thhalv10024820m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 1811399 | 1816177 | + | Thhalv10024820m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 63,178.10 Da | 45.98 | 83.48 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04928 | ACT_TyrKc | 179 | 245 | 5.2745E-35 | - |
| CDD | cd13999 | STKc_MAP3K-like | 302 | 542 | 4.12527E-141 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 293 | 542 | 3.4E-73 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 267 | 542 | 7.14E-83 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 179 | 248 | 5.0E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 372 | 554 | 3.1E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 371 | 8.9E-31 | - |
| SMART | SM00220 | serkin_6 | 293 | 546 | 5.2E-66 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 181 | 256 | 14.440338 | IPR002912 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 293 | 546 | 45.247894 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 410 | 422 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 513 | 535 | 1.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 404 | 422 | 1.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 450 | 460 | 1.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 367 | 380 | 1.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 469 | 491 | 1.4E-17 | IPR001245 |
| Coils | Coil | Coil | 231 | 251 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35780.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_006412062.1 | serine/threonine-protein kinase STY17 [Eutrema salsugineum] | 0 |
| Q8RWL6 | Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1 | 0 | |
| TrEMBL | V4LSG0 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024820mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology