Basic Information
Locus ID:
Thhalv10024761m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 7831757 | 7834584 | + | Thhalv10024761m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.83 | 65,802.51 Da | 46.70 | 89.31 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 398 | 524 | 1.00442E-61 | - |
| Pfam | PF16953 | Protein-only RNase P | 335 | 569 | 1.3E-59 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 83 | 292 | 5.2E-74 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 91 | 570 | 2.6E-211 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 351 | 535 | 2.6E-211 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 94 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21900.1 | proteinaceous RNase P 3. | 0 |
| RefSeq | XP_006413718.1 | proteinaceous RNase P 3 [Eutrema salsugineum] | 0 |
| F4JKB6 | Proteinaceous RNase P 3 OS=Arabidopsis thaliana OX=3702 GN=PRORP3 PE=1 SV=1 | 0 | |
| TrEMBL | V4P6J2 | ribonuclease P OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024761mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology