Basic Information
Locus ID:
Thhalv10024738m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 114750 | 119635 | + | Thhalv10024738m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 67,219.38 Da | 50.91 | 83.11 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 315 | 558 | 9.69538E-147 | - |
| Pfam | PF01842 | ACT domain | 194 | 240 | 1.2E-6 | IPR002912 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 309 | 558 | 1.2E-73 | IPR001245 |
| SUPERFAMILY | SSF55021 | ACT-like | 192 | 266 | 1.62E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 296 | 558 | 1.48E-86 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 299 | 386 | 8.6E-30 | - |
| Gene3D | G3DSA:3.30.70.260 | - | 194 | 267 | 1.5E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 387 | 589 | 9.4E-64 | - |
| SMART | SM00220 | serkin_6 | 309 | 561 | 1.3E-71 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 309 | 561 | 46.421017 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 194 | 268 | 13.981392 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 426 | 438 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 485 | 507 | 1.5E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 529 | 551 | 1.5E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 466 | 476 | 1.5E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 383 | 396 | 1.5E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 420 | 438 | 1.5E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 138 | - | - |
| Coils | Coil | Coil | 244 | 264 | - | - |
| Coils | Coil | Coil | 555 | 575 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38470.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_006411637.1 | serine/threonine-protein kinase STY46 isoform X1 [Eutrema salsugineum] | 0 |
| F4JTP5 | Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 | 0 | |
| TrEMBL | V4LR89 | Serine/threonine-protein kinase STY46-like OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024738mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology