Basic Information
Locus ID:
Thhalv10024688m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 9800897 | 9803370 | + | Thhalv10024688m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 67,475.84 Da | 46.37 | 66.41 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 443 | 520 | 1.05234E-49 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 450 | 495 | 1.4E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 65 | 266 | 1.3E-51 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 449 | 516 | 1.03E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 438 | 524 | 5.1E-18 | IPR036638 |
| SMART | SM00353 | finulus | 452 | 501 | 9.0E-17 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 446 | 495 | 17.281994 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 412 | - | - |
| Coils | Coil | Coil | 492 | 519 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G17880.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_006414178.1 | transcription factor MYC4 [Eutrema salsugineum] | 0 |
| O49687 | Transcription factor MYC4 OS=Arabidopsis thaliana OX=3702 GN=MYC4 PE=1 SV=1 | 0 | |
| TrEMBL | V4P7R1 | BHLH domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024688mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology