Basic Information
Locus ID:
Thhalv10024680m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
cysteine-rich receptor-like protein kinase 43
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 4919939 | 4922713 | - | Thhalv10024680m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 70,127.19 Da | 40.83 | 85.31 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 337 | 606 | 5.68887E-87 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 36 | 128 | 3.4E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 148 | 235 | 2.4E-10 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 332 | 603 | 1.3E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 620 | 2.7E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 407 | 611 | 1.2E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 29 | 130 | 6.9E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 237 | 1.1E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 406 | 1.0E-31 | - |
| SMART | SM00220 | serkin_6 | 331 | 621 | 1.5E-34 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 135 | 237 | 13.89995 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 331 | 621 | 37.530731 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 130 | 15.004306 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 337 | 359 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 450 | 462 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28670.1 | Protein kinase family protein with domain of unknown function (DUF26). | 0 |
| RefSeq | XP_024005313.1 | putative cysteine-rich receptor-like protein kinase 43 [Eutrema salsugineum] | 0 |
| Q9M0G5 | Cysteine-rich receptor-like protein kinase 46 OS=Arabidopsis thaliana OX=3702 GN=CRK46 PE=3 SV=1 | 0 | |
| TrEMBL | V4MNA6 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024680mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology