Basic Information
Locus ID:
Thhalv10024311m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1 | 5003287 | 5006373 | - | Thhalv10024311m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 108,636.79 Da | 32.26 | 102.89 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 401 | 461 | 1.1E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 112 | 171 | 7.7E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 686 | 957 | 2.0E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 60 | 3.6E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 355 | 604 | 7.03E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 389 | 1.8E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 962 | 1.6E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 277 | 4.0E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 981 | 4.3E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 175 | 5.6E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 613 | 2.9E-96 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 766 | 8.8E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 496 | 519 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 209 | 232 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 257 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 424 | 448 | 180.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 683 | 966 | 1.3E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 136 | 159 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 86 | 110 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 160 | 184 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 400 | 423 | 350.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 969 | 36.668556 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 813 | 825 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 689 | 712 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28490.1 | Leucine-rich receptor-like protein kinase family protein. member of Receptor kinase-like protein family | 0 |
| RefSeq | XP_006412947.1 | receptor-like protein kinase 5 [Eutrema salsugineum] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | V4LUS8 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10024311mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology