Basic Information
Locus ID:
Thhalv10023820m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_8 | 9028954 | 9029711 | + | Thhalv10023820m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 28,688.72 Da | 40.95 | 93.68 | -0.16 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16740.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_020865637.1 | putative F-box protein At3g19560 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q9LUQ9 | F-box/kelch-repeat protein At3g16740 OS=Arabidopsis thaliana OX=3702 GN=At3g16740 PE=1 SV=1 | 0 | |
| TrEMBL | V4KEY8 | FBA_1 domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10023820mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 24 | AT1G24800.1, AT1G24881.1, AT1G25055.1, AT1G25150.1 ... |
| Brassicaceae | Eutrema salsugineum | 15 | Thhalv10000447m.g.v1.0, Thhalv10002786m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g11150.v2.2, Sp3g32750.v2.2 |
| Brassicaceae | Brassica nigra | 13 | BniB01g039260.2N, BniB02g015480.2N, BniB04g007550.2N ... |