Basic Information
Locus ID:
Thhalv10023423m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_8 | 8280591 | 8283505 | + | Thhalv10023423m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 55,376.77 Da | 46.99 | 94.05 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 192 | 458 | 1.24724E-100 | - |
| Pfam | PF00069 | Protein kinase domain | 187 | 455 | 3.0E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 169 | 466 | 1.11E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 262 | 473 | 9.9E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 166 | 261 | 2.7E-34 | - |
| SMART | SM00220 | serkin_6 | 186 | 465 | 4.1E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 186 | 465 | 38.887592 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 192 | 215 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 308 | 320 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 480 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_024004791.1 | probable receptor-like protein kinase At5g18500 [Eutrema salsugineum] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | V4MEJ7 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10023423mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology