Basic Information
Locus ID:
Thhalv10023412m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_8 | 3548882 | 3552317 | + | Thhalv10023412m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 59,611.26 Da | 45.74 | 78.94 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 106 | 473 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 428 | 472 | 1.5E-4 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 109 | 409 | 2.0E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 83 | 458 | 4.32E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 428 | 438 | 9.9E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 308 | 427 | 9.9E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 192 | 259 | 3.8E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 79 | 191 | 3.8E-69 | - |
| SMART | SM00220 | serkin_6 | 108 | 409 | 1.3E-102 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 410 | 474 | 0.0034 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 410 | 482 | 12.846769 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 108 | 409 | 47.014645 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 114 | 137 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 227 | 239 | - | IPR008271 |
| Coils | Coil | Coil | 81 | 101 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G09890.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_006392087.1 | serine/threonine-protein kinase tricorner [Eutrema salsugineum] | 0 |
| Q2LZZ7 | Serine/threonine-protein kinase tricornered OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=trc PE=3 SV=1 | 0 | |
| TrEMBL | V4KPS8 | Serine/threonine-protein kinase tricorner-like OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10023412mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology