Basic Information
Locus ID:
Thhalv10023399m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
atpi4k gamma 4,pi4k gamma 4,ubdk gamma 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_8 | 165824 | 167709 | + | Thhalv10023399m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 59,988.93 Da | 41.85 | 89.17 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 109 | 178 | 6.66887E-9 | - |
| Pfam | PF00240 | Ubiquitin family | 34 | 103 | 1.2E-14 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 240 | 491 | 1.6E-55 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 109 | 181 | 7.6E-5 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 32 | 106 | 6.68E-15 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 531 | 2.55E-6 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 104 | 181 | 2.76E-11 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 31 | 103 | 1.2E-11 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 106 | 187 | 1.5E-8 | - |
| SMART | SM00213 | ubq_7 | 31 | 102 | 1.9E-5 | IPR000626 |
| SMART | SM00213 | ubq_7 | 107 | 180 | 1.6 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 31 | 106 | 13.075337 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 97 | 181 | 11.246203 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_006391615.1 | phosphatidylinositol 4-kinase gamma 2 [Eutrema salsugineum] | 0 |
| Q9SGW8 | Phosphatidylinositol 4-kinase gamma 2 OS=Arabidopsis thaliana OX=3702 GN=PI4KG2 PE=1 SV=2 | 0 | |
| TrEMBL | V4MCE6 | 1-phosphatidylinositol 4-kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10023399mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology