Basic Information
Locus ID:
Thhalv10023298m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
ion transport
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_8 | 6005377 | 6009868 | - | Thhalv10023298m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 87,164.80 Da | 49.47 | 101.70 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 353 | 619 | 8.0E-70 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 165 | 4.7E-36 | IPR032880 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 186 | 342 | 4.4E-24 | IPR027815 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 709 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 765 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 0 |
| RefSeq | XP_006392284.1 | CSC1-like protein RXW8 [Eutrema salsugineum] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 0 | |
| TrEMBL | V4JVY1 | CSC1-like protein RXW8 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10023298mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology